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LIM homeobox transcription factor 1 beta
Scientific background:
Pathophysiology: The gene product of LMX1B is a LIM-homeodomain transcription factor, which plays a role in skeletal and kidney development. It regulates normal patterning of the dorsoventral axis of the limbs. In the kidneys the gene is predominantly expressed by podocytes, where it regulates the translation of many crucial genes, such as COL4A4, COL4A3, CD2AP, NPHS2, and NPHS1.
Clinical signs: Mutations of the LMX1B gene cause an autosomal dominant disorder called nail-patella syndrome, which involves skeletal abnormalities (dysplasia of the nails, patellar aplasia or hypoplasia, iliac horns, dysplasia of the elbows) and is often associated with hereditary glaucoma and progressive nephropathy.
Epidemiology: The incidence of the disease caused by LMX1B mutations is about 1 in 50,000 live births. The probability of new mutations seems to increase with father's age.
Methodology:
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clinical test |
Method |
Genomic sequencing of the entire coding region |
| Turn-around time |
9 working days |
| Effort |
little |
| Specimen |
DNA |
| Quality assessment |
Internal quality control only |
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All known and new missense, nonsense and splice mutations can be detected. |
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|
clinical test |
Method |
Carrier testing |
| Turn-around time |
6 working days |
| Effort |
little |
| Specimen |
DNA |
| Quality assessment |
Internal quality control only |
| |
The test is only specific about the mutation already known in this kindred. |
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research test |
Method |
Gene dosage measurements |
| Turn-around time |
9 working days |
| Effort |
little |
| Specimen |
DNA |
| Quality assessment |
Internal quality control only |
| |
Of the gene rearrangements, this method is useful to detect large deletions or duplications. |
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