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GNAS complex locus
Scientific background:
Summary: The gene product is involved cGMP signal transduction. Imprinting influences which isofoms are transcribed, spliced, and translated. Deficiency causes pseudohypoparathyroidism, Albright osteodystrophy and pituitary tumor.
Gene: The gene is located on chromosome 10 (20q13.2), spans approximately 74kb, and consists of 13 exons. Four splice variants are known. The differ predominantly in their first exon. The protein product of the splice variant with the most upstream first exon is also known as NESP55. Exons 2-13 are also transcribed but translation is terminated by a stop codon in exon 1. The function of NESP55 remains to be elucidated. The protein product of the splice variant with the most downstream transcription start is called Gs, a component of G-coupled receptors. Exons 2-13 express all essential components of normal protein function. A third splice variant with an exceptional large exon 1 is named XLAS. As exons 2-13 are identically expressed its function seems to be similar to Gs. Still an other exon 1, dubbed 1A, with a different pattern of imprinting is postulated. The understanding of gene function is further convoluted by the discovery of a NESP55 complementary transcription product. Genomic imprinting ensures different gene products from the maternal and paternal alleles expressed in renal tubules. Genomic imprinting is an epigenetic phenomenon associated with methylation of the promoter (at cytidines within CpG dinucleotides) that inactivates distinct splice variants. Normally the splice variants XLAS and A1 are inactivated on the maternal allele whereas NESP55 is inactivated on the paternal allele.
Interpretation: Mutations that affect the coding region of the Gs splice variant result in Albright hereditary osteodystrophy (AOH) characterized by skeletal abnormalities and endocronological dysfunctions. If inherited from father AOH is associated with pseudopseudohypoparathyroidism (PPHP) whereas maternal transmission results in several endocrinological dysfunctions including thyreotropin resistance and pseudohypoparathyroidism (PHP1A). If both alleles exhibit paternal imprinting (lack of methylation) of the promotor of the splice variant A1, then in the distal tubule insufficient Gs will be transcribed and a PTH resistence of the kidney ensues (PHP1B).
Methodology:
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clinical test |
Method |
Genomic sequencing of the entire coding region |
| Turn-around time |
25 working days |
| Effort |
medium |
| Specimen |
DNA |
| Quality assessment |
Internal quality control only |
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All known and new missense, nonsense and splice mutations can be detected. |
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clinical test |
Method |
Methylation test |
| Turn-around time |
25 working days |
| Effort |
little |
| Specimen |
DNA |
| Quality assessment |
Internal quality control only |
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 |
|
clinical test |
Method |
Multiplex Ligation-Dependent Probe Amplification |
| Turn-around time |
25 working days |
| Effort |
little |
| Specimen |
DNA |
| Quality assessment |
Internal quality control only |
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|
clinical test |
Method |
Carrier testing |
| Turn-around time |
5 working days |
| Effort |
little |
| Specimen |
DNA |
| Quality assessment |
Internal quality control only |
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The test is only specific about the mutation already known in this kindred. |
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